Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | IZT61_21615 | P96589 | + | 5297216 - 5298952 | 63249.9 |
| beta-n-acetylhexosaminidase | IZT61_21620 | B2UQG6 | + | 5299103 - 5300695 | 60596.9 |
| Trna-arg | Not Available | Not Available | + | 5301075 - 5301149 | Not Available |
| sh3 domain-containing protein | IZT61_21630 | Not Available | - | 5301246 - 5302241 | 37133.8 |
| duf1080 domain-containing protein | IZT61_21635 | Not Available | - | 5302471 - 5303307 | 31448.4 |
| (d)cmp kinase | IZT61_21640 | Q8A626 | - | 5303632 - 5304312 | 25562.3 |
| aminoacyl-trna hydrolase | IZT61_21645 | P40711 | + | 5304386 - 5304796 | 15588.0 |
| lipid a deacylase lpxr family protein | IZT61_21650 | Not Available | - | 5304999 - 5305946 | 35392.8 |
| endopeptidase la | IZT61_21655 | A5FG89 | - | 5306224 - 5308695 | 92244.9 |
| tetratricopeptide repeat protein | IZT61_21660 | Not Available | + | 5309004 - 5309624 | 23583.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.