Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | IZT61_21565 | Not Available | - | 5284158 - 5286038 | 66908.8 |
| acyl-coa reductase | IZT61_21570 | P29236 | - | 5286327 - 5287346 | 38305.4 |
| 4fe-4s dicluster domain-containing protein | IZT61_21575 | P00208 | + | 5287424 - 5287774 | 12784.7 |
| universal stress protein | IZT61_21580 | Q57951 | - | 5288157 - 5288609 | 16265.4 |
| c40 family peptidase | IZT61_21585 | O35010 | + | 5288719 - 5289504 | 29325.7 |
| catalase/peroxidase hpi | IZT61_21590 | A5FD11 | + | 5290288 - 5292570 | 83532.9 |
| mechanosensitive ion channel family protein | IZT61_21595 | O66994 | - | 5292634 - 5293521 | 33275.3 |
| translation initiation factor if-3 | IZT61_21600 | A6L7J6 | - | 5293789 - 5294358 | 21814.0 |
| mechanosensitive ion channel family protein | IZT61_21605 | P0C0S2 | - | 5294857 - 5296755 | 71049.8 |
| hypothetical protein | IZT61_21610 | Not Available | + | 5296972 - 5297136 | 6085.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.