Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| galactokinase | IZT61_21465 | Q8R8R7 | + | 5262929 - 5264080 | 42397.8 |
| sodium/sugar symporter | IZT61_21470 | P96169 | + | 5264102 - 5265778 | 60612.3 |
| duf421 domain-containing protein | IZT61_21475 | P75839 | + | 5266467 - 5267180 | 26735.5 |
| heme exporter protein ccmb | IZT61_21480 | Not Available | + | 5267899 - 5268564 | 24540.7 |
| cytochrome c biogenesis protein ccsa | IZT61_21485 | P29961 | + | 5268731 - 5269426 | 26462.6 |
| ccmd family protein | IZT61_21490 | Not Available | + | 5269481 - 5269699 | 8244.62 |
| glu/leu/phe/val dehydrogenase | IZT61_21495 | Q54KB7 | + | 5269834 - 5271255 | 51830.1 |
| cytochrome c maturation protein ccme | IZT61_21500 | Not Available | + | 5273094 - 5273528 | 16410.5 |
| cytochrome c biogenesis protein ccsa | IZT61_21505 | P45037 | + | 5273533 - 5276001 | 92790.0 |
| duf2520 domain-containing protein | IZT61_21510 | Not Available | + | 5276006 - 5276770 | 27687.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.