Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_02110 | Not Available | - | 485311 - 485451 | 5414.58 |
| hypothetical protein | IZT61_02115 | Not Available | - | 485572 - 486255 | 25538.9 |
| prolyl oligopeptidase family serine peptidase | IZT61_02120 | A0A0K2VM55 | - | 486802 - 488067 | 48214.0 |
| ragb/susd family nutrient uptake outer membrane protein | IZT61_02125 | T2KN63 | - | 488157 - 489812 | 61978.6 |
| susc/raga family tonb-linked outer membrane protein | IZT61_02130 | T2KPJ3 | - | 489818 - 492649 | 103977.0 |
| ragb/susd family nutrient uptake outer membrane protein | IZT61_02135 | T2KN63 | - | 492680 - 494353 | 62455.1 |
| tonb-dependent receptor | IZT61_02140 | T2KPJ3 | - | 494365 - 497535 | 115279.0 |
| hypothetical protein | IZT61_02145 | Not Available | - | 497981 - 499198 | 44421.1 |
| glycoside hydrolase family 88 protein | IZT61_02150 | T2KLZ3 | - | 499259 - 500449 | 45543.0 |
| response regulator | IZT61_02155 | T2KMF4 | - | 500752 - 504732 | 150406.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.