Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | IZT61_21415 | Not Available | + | 5246560 - 5250165 | 137593.0 |
| hypothetical protein | IZT61_21420 | Not Available | + | 5250263 - 5250487 | 8270.99 |
| gaf domain-containing protein | IZT61_21425 | Not Available | + | 5251074 - 5253485 | 93303.6 |
| hypothetical protein | IZT61_21430 | Not Available | - | 5254577 - 5254807 | 8695.41 |
| acetate kinase | IZT61_21435 | A5FE24 | - | 5254928 - 5256124 | 43034.6 |
| phosphate acetyltransferase | IZT61_21440 | Q726S7 | - | 5256128 - 5258215 | 76599.8 |
| hypothetical protein | IZT61_21445 | Not Available | + | 5258531 - 5259166 | 23783.5 |
| glucose 1-dehydrogenase | IZT61_21450 | P39483 | + | 5259785 - 5260555 | 28109.6 |
| nudix hydrolase | IZT61_21455 | Q58549 | - | 5261005 - 5261703 | 26762.5 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | IZT61_21460 | P31764 | + | 5261857 - 5262918 | 40470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.