Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2236 domain-containing protein | IZT61_21365 | Not Available | - | 5233395 - 5234336 | 36583.3 |
| hypothetical protein | IZT61_21370 | Not Available | - | 5234342 - 5234830 | 18445.2 |
| erap1-like c-terminal domain-containing protein | IZT61_21375 | Q96ZT9 | + | 5235362 - 5237926 | 97227.5 |
| sdr family oxidoreductase | IZT61_21380 | P0AG85 | - | 5238206 - 5239213 | 35247.1 |
| hypothetical protein | IZT61_21385 | Not Available | + | 5239673 - 5240032 | 13259.2 |
| hypothetical protein | IZT61_21390 | Not Available | + | 5240131 - 5240397 | 10686.2 |
| hd domain-containing protein | IZT61_21395 | Not Available | + | 5240833 - 5242047 | 46454.3 |
| polyphosphate kinase 1 | IZT61_21400 | Q7MNJ0 | + | 5242051 - 5244084 | 77497.1 |
| sdia-regulated domain-containing protein | IZT61_21405 | Not Available | + | 5244095 - 5244997 | 32718.7 |
| duf559 domain-containing protein | IZT61_21410 | P44075 | + | 5245537 - 5245947 | 16166.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.