Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | IZT61_21315 | P29939 | + | 5223932 - 5224360 | 15250.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | IZT61_21320 | P77489 | - | 5224438 - 5226567 | 75866.0 |
| xanthine dehydrogenase family protein subunit m | IZT61_21325 | P77324 | - | 5226581 - 5227564 | 35235.4 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | IZT61_21330 | P77165 | - | 5227583 - 5228365 | 28292.2 |
| crp/fnr family transcriptional regulator | IZT61_21335 | P0A9E7 | - | 5228533 - 5229126 | 22482.1 |
| molybdopterin-dependent oxidoreductase | IZT61_21340 | G8QM63 | - | 5230060 - 5230851 | 30031.5 |
| cytochrome b/b6 domain-containing protein | IZT61_21345 | G8QM62 | - | 5230823 - 5231545 | 28186.5 |
| sigma-70 family rna polymerase sigma factor | IZT61_21350 | P45215 | + | 5231737 - 5232333 | 22998.4 |
| hypothetical protein | IZT61_21355 | Not Available | + | 5232336 - 5232602 | 10256.6 |
| ahpc/tsa family protein | IZT61_21360 | Q5S1S6 | + | 5232657 - 5233238 | 21247.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.