Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2147 domain-containing protein | IZT61_21265 | Not Available | + | 5216066 - 5216497 | 16397.0 |
| oxidoreductase | IZT61_21270 | Not Available | + | 5216503 - 5217519 | 36813.6 |
| 4-phosphopantetheinyl transferase family protein | IZT61_21275 | Not Available | - | 5217509 - 5218072 | 21481.5 |
| acyl carrier protein | IZT61_21280 | B6IN76 | - | 5218059 - 5218322 | 9546.41 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | IZT61_21285 | Q02K94 | - | 5218315 - 5219592 | 44877.6 |
| beta-hydroxyacyl-acp dehydratase | IZT61_21290 | Q8DI01 | - | 5219588 - 5220034 | 16403.9 |
| type iii polyketide synthase | IZT61_21295 | Q7VEV2 | - | 5220036 - 5221088 | 38609.7 |
| methyltransferase domain-containing protein | IZT61_21300 | Not Available | - | 5221085 - 5221795 | 26500.2 |
| nad(p)/fad-dependent oxidoreductase | IZT61_21305 | Q9U641 | - | 5221796 - 5222929 | 41872.9 |
| duf2490 domain-containing protein | IZT61_21310 | Not Available | - | 5223113 - 5223697 | 23042.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.