Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | IZT61_21215 | Q8G2M7 | + | 5204168 - 5205250 | 40072.3 |
| efflux rnd transporter permease subunit | IZT61_21220 | Q8FWV9 | + | 5205272 - 5208442 | 115430.0 |
| tolc family protein | IZT61_21225 | O31101 | + | 5208435 - 5209886 | 53624.9 |
| helix-turn-helix domain-containing protein | IZT61_21230 | A0A0H2ZIC3 | - | 5211246 - 5212208 | 35966.3 |
| dinb family protein | IZT61_21235 | Not Available | + | 5212344 - 5212838 | 18547.3 |
| dinb family protein | IZT61_21240 | Not Available | + | 5212842 - 5213342 | 19019.0 |
| hypothetical protein | IZT61_21245 | Not Available | + | 5213339 - 5213752 | 15578.5 |
| voc family protein | IZT61_21250 | P16681 | + | 5213844 - 5214272 | 15315.2 |
| doxx family membrane protein | IZT61_21255 | Not Available | + | 5214347 - 5214727 | 14021.2 |
| hypothetical protein | IZT61_21260 | Not Available | - | 5215543 - 5215974 | 15150.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.