Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | IZT61_21165 | O31834 | + | 5197398 - 5197628 | 8393.47 |
| hypothetical protein | IZT61_21170 | Not Available | + | 5197685 - 5197957 | 10417.7 |
| mbl fold metallo-hydrolase | IZT61_21175 | Q7MUY1 | + | 5198007 - 5198771 | 28500.2 |
| Trna-leu | Not Available | Not Available | + | 5198915 - 5198998 | Not Available |
| nad(p)-binding domain-containing protein | IZT61_21185 | Q47719 | + | 5199347 - 5200027 | 23622.1 |
| antibiotic biosynthesis monooxygenase | IZT61_21190 | Not Available | + | 5200209 - 5200610 | 14897.5 |
| molybdate abc transporter substrate-binding protein | IZT61_21195 | Q9I2N2 | + | 5200721 - 5201497 | 28651.8 |
| molybdate abc transporter permease subunit | IZT61_21200 | Q08382 | + | 5201501 - 5202172 | 24757.9 |
| atp-binding cassette domain-containing protein | IZT61_21205 | P56344 | + | 5202169 - 5202783 | 23116.2 |
| peptide-methionine (s)-s-oxide reductase | IZT61_21210 | Q119G2 | - | 5203249 - 5203749 | 18926.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.