Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_21115 | Not Available | + | 5188353 - 5188661 | 11139.7 |
| hypothetical protein | IZT61_21120 | Not Available | + | 5189240 - 5189545 | 10741.8 |
| Trna-leu | Not Available | Not Available | + | 5189699 - 5189780 | Not Available |
| trigger factor | IZT61_21130 | Q4FM95 | + | 5189973 - 5191322 | 51618.1 |
| four helix bundle protein | IZT61_21135 | Not Available | + | 5191395 - 5191751 | 13388.3 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | IZT61_21140 | Q64NW2 | + | 5191903 - 5192610 | 26087.3 |
| atp-dependent clp protease atp-binding subunit clpx | IZT61_21145 | Q8A128 | + | 5192594 - 5193832 | 46075.1 |
| amp nucleosidase | IZT61_21150 | P0AE13 | + | 5193914 - 5194777 | 31940.9 |
| rna polymerase sigma factor rpod/siga | IZT61_21155 | P33656 | - | 5195507 - 5196367 | 32636.0 |
| hypothetical protein | IZT61_21160 | Not Available | + | 5196778 - 5197377 | 22068.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.