Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | IZT61_21065 | Q9ZHD0 | + | 5170902 - 5172146 | 46365.5 |
| abc transporter atp-binding protein | IZT61_21070 | Q58903 | + | 5172257 - 5172955 | 26069.3 |
| abc transporter permease | IZT61_21075 | Q89NX6 | + | 5173122 - 5175491 | 87767.4 |
| abc transporter permease | IZT61_21080 | Q2EHL8 | + | 5175677 - 5178064 | 89169.4 |
| abc transporter permease | IZT61_21085 | Q2EHL8 | + | 5178373 - 5180796 | 90523.8 |
| hypothetical protein | IZT61_21090 | Not Available | + | 5180915 - 5181052 | 5476.63 |
| abc transporter permease | IZT61_21095 | O31712 | + | 5181143 - 5183542 | 89461.5 |
| abc transporter permease | IZT61_21100 | O31712 | + | 5183673 - 5186066 | 89130.2 |
| abc transporter atp-binding protein | IZT61_21105 | Q58206 | + | 5186454 - 5187164 | 26382.7 |
| abc transporter substrate-binding protein | IZT61_21110 | O34805 | + | 5187430 - 5188227 | 30145.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.