Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1573 domain-containing protein | IZT61_20965 | Not Available | + | 5150333 - 5150788 | 16060.4 |
| preprotein translocase subunit yajc | IZT61_20970 | O67295 | + | 5150944 - 5151267 | 11582.4 |
| ybbr-like domain-containing protein | IZT61_20975 | Not Available | + | 5151476 - 5152336 | 32676.6 |
| dephospho-coa kinase | IZT61_20980 | Q2RYU8 | + | 5152336 - 5152935 | 21882.3 |
| exonuclease | IZT61_20985 | B1ZZL9 | + | 5153097 - 5154041 | 35909.9 |
| hypothetical protein | IZT61_20990 | Q5VUE5 | + | 5154283 - 5154426 | 5610.83 |
| uma2 family endonuclease | IZT61_20995 | P72821 | - | 5154453 - 5155049 | 23342.3 |
| uma2 family endonuclease | IZT61_21000 | P72821 | - | 5155077 - 5155673 | 23204.5 |
| uma2 family endonuclease | IZT61_21005 | P72873 | - | 5155701 - 5156297 | 23215.5 |
| uma2 family endonuclease | IZT61_21010 | P72821 | - | 5156325 - 5156921 | 23182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.