Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | IZT61_20865 | Q75E59 | + | 5122695 - 5123426 | 27397.9 |
| sdr family oxidoreductase | IZT61_20870 | Q99J47 | + | 5123529 - 5124341 | 29266.1 |
| hypothetical protein | IZT61_20875 | Not Available | + | 5124530 - 5124679 | 5271.19 |
| hypothetical protein | IZT61_20880 | Not Available | + | 5124894 - 5125100 | 7655.18 |
| anthranilate phosphoribosyltransferase | IZT61_20885 | A0M4T1 | + | 5125487 - 5126473 | 36053.1 |
| phosphoribosylanthranilate isomerase | IZT61_20890 | A6L9J9 | + | 5126473 - 5127108 | 23815.6 |
| tryptophan synthase subunit beta | IZT61_20895 | A6L9K4 | + | 5127339 - 5128520 | 43125.6 |
| tryptophan synthase subunit alpha | IZT61_20900 | A6GWZ0 | + | 5128599 - 5129363 | 28119.7 |
| tetr/acrr family transcriptional regulator | IZT61_20905 | Q0S868 | + | 5131951 - 5132556 | 23200.1 |
| efflux rnd transporter periplasmic adaptor subunit | IZT61_20910 | P24180 | + | 5132630 - 5133832 | 42927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.