Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | + | 5113900 - 5113986 | Not Available |
| Trna-gly | Not Available | Not Available | + | 5114055 - 5114130 | Not Available |
| recx family transcriptional regulator | IZT61_20825 | Q97GF7 | - | 5114224 - 5114712 | 18547.6 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | IZT61_20830 | Q890X1 | + | 5114774 - 5117233 | 91761.6 |
| duf502 domain-containing protein | IZT61_20835 | F4IQJ6 | + | 5117440 - 5118030 | 21641.0 |
| arsenate reductase (glutaredoxin) | IZT61_20840 | P76569 | + | 5118043 - 5118387 | 13226.0 |
| hypothetical protein | IZT61_20845 | Not Available | - | 5118996 - 5119493 | 19161.9 |
| tigr00730 family rossman fold protein | IZT61_20850 | O05306 | - | 5119690 - 5120397 | 26896.3 |
| sodium:solute symporter | IZT61_20855 | Q5E733 | - | 5120416 - 5121924 | 55725.2 |
| recombination protein recr | IZT61_20860 | Q11W94 | + | 5122078 - 5122695 | 22840.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.