Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | IZT61_20665 | Q8P151 | + | 5073512 - 5074018 | 19055.4 |
| hpt domain-containing protein | IZT61_20670 | Not Available | + | 5074036 - 5074410 | 14580.3 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | IZT61_20675 | P39823 | - | 5074417 - 5075115 | 25821.4 |
| transcription termination factor rho | IZT61_20680 | O83281 | - | 5075491 - 5077200 | 63542.3 |
| orotidine-5'-phosphate decarboxylase | IZT61_20685 | A6KWL1 | + | 5077623 - 5078453 | 30859.9 |
| eama family transporter | IZT61_20690 | O34416 | + | 5078703 - 5079608 | 32911.5 |
| hsp20/alpha crystallin family protein | IZT61_20695 | Q4UKR8 | + | 5079844 - 5080290 | 16960.8 |
| hypothetical protein | IZT61_20700 | Not Available | + | 5080666 - 5085195 | 166202.0 |
| hypothetical protein | IZT61_20705 | Not Available | + | 5085221 - 5085541 | 12020.3 |
| fibronectin type iii domain-containing protein | IZT61_20710 | A2ASS6 | + | 5085712 - 5088813 | 114959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.