Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_20615 | Q6GGY8 | + | 5060176 - 5061642 | 53240.7 |
| hypothetical protein | IZT61_20620 | Not Available | + | 5061907 - 5062173 | 10092.2 |
| dna-protecting protein dpra | IZT61_20625 | P73345 | + | 5062231 - 5063322 | 39867.4 |
| pyridoxal-phosphate dependent enzyme | IZT61_20630 | P9WP50 | + | 5063820 - 5065181 | 49704.5 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | IZT61_20635 | Q8A681 | - | 5065985 - 5067310 | 48170.9 |
| duf4290 domain-containing protein | IZT61_20640 | Not Available | - | 5067429 - 5068109 | 26183.9 |
| histidine phosphatase family protein | IZT61_20645 | Q94BY1 | - | 5068442 - 5068939 | 18417.7 |
| dna polymerase/3'-5' exonuclease polx | IZT61_20650 | P94544 | - | 5069016 - 5070707 | 63178.1 |
| hypothetical protein | IZT61_20655 | Not Available | + | 5070758 - 5071420 | 24184.9 |
| signal peptide peptidase sppa | IZT61_20660 | P73689 | - | 5071706 - 5073472 | 64930.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.