Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2281 domain-containing protein | IZT61_20565 | Not Available | - | 5052512 - 5052721 | 7853.4 |
| adp-forming succinate--coa ligase subunit beta | IZT61_20570 | A5FHX8 | - | 5052927 - 5054120 | 42823.6 |
| hypothetical protein | IZT61_20575 | Not Available | - | 5054370 - 5054672 | 10750.6 |
| duf4173 domain-containing protein | IZT61_20580 | Not Available | - | 5054884 - 5056458 | 59652.0 |
| hypothetical protein | IZT61_20585 | Not Available | - | 5056476 - 5056781 | 11283.4 |
| transcriptional regulator | IZT61_20590 | Q57874 | - | 5056838 - 5057134 | 11029.6 |
| hypothetical protein | IZT61_20595 | Not Available | - | 5057136 - 5057771 | 23619.4 |
| abc transporter atp-binding protein | IZT61_20600 | Q8A1M1 | + | 5058157 - 5058807 | 23440.5 |
| hypothetical protein | IZT61_20605 | Not Available | + | 5059083 - 5059562 | 17565.3 |
| had hydrolase-like protein | IZT61_20610 | Not Available | + | 5059564 - 5060172 | 23917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.