Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_20465 | Not Available | - | 5032211 - 5032384 | 6501.21 |
| thymidylate synthase | IZT61_20470 | Q11VK5 | - | 5032556 - 5033377 | 31130.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | IZT61_20475 | A6L5X6 | + | 5033616 - 5034419 | 29692.6 |
| osmc family protein | IZT61_20480 | P0ADX3 | + | 5034542 - 5034961 | 15436.9 |
| o-succinylhomoserine sulfhydrylase | IZT61_20485 | P55218 | + | 5035031 - 5036200 | 43175.7 |
| pirin family protein | IZT61_20490 | P46852 | + | 5036541 - 5037263 | 26589.3 |
| hypothetical protein | IZT61_20495 | Not Available | + | 5037361 - 5037657 | 10820.2 |
| duf1049 domain-containing protein | IZT61_20500 | Not Available | - | 5038040 - 5038315 | 10141.4 |
| hypothetical protein | IZT61_20505 | Not Available | - | 5038319 - 5041123 | 107702.0 |
| dmt family transporter | IZT61_20510 | Not Available | - | 5042572 - 5043449 | 32751.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.