Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | IZT61_20365 | A1ST27 | + | 5008043 - 5009293 | 46199.1 |
| hypothetical protein | IZT61_20370 | Not Available | + | 5009790 - 5010254 | 16934.3 |
| uroporphyrinogen-iii c-methyltransferase | IZT61_20375 | Q58375 | + | 5010693 - 5011487 | 28631.2 |
| glycogen synthase | IZT61_20380 | A5FG96 | + | 5011846 - 5013258 | 53305.7 |
| glucose-1-phosphate adenylyltransferase | IZT61_20385 | B8HM61 | + | 5013267 - 5014535 | 46904.0 |
| hypothetical protein | IZT61_20390 | Not Available | + | 5014878 - 5015081 | 8059.77 |
| hypothetical protein | IZT61_20395 | Not Available | + | 5015216 - 5015425 | 7704.76 |
| mbl fold metallo-hydrolase | IZT61_20400 | P04190 | + | 5015506 - 5016417 | 33948.1 |
| cytochrome ubiquinol oxidase subunit i | IZT61_20405 | C0SP90 | + | 5016716 - 5018050 | 49028.6 |
| cytochrome d ubiquinol oxidase subunit ii | IZT61_20410 | P94365 | + | 5018132 - 5019136 | 37642.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.