Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_20315 | Not Available | + | 4995452 - 4995895 | 16790.7 |
| m23 family metallopeptidase | IZT61_20320 | Not Available | - | 4996075 - 4996704 | 24436.4 |
| metallophosphoesterase | IZT61_20325 | O34870 | - | 4996874 - 4998103 | 46196.1 |
| response regulator | IZT61_20330 | Q9KLK7 | - | 4998198 - 4999979 | 66713.4 |
| rrf2 family transcriptional regulator | IZT61_20335 | O68025 | + | 5000116 - 5000562 | 16311.1 |
| hepn domain-containing protein | IZT61_20340 | I3R637 | + | 5001006 - 5003099 | 78406.3 |
| uroporphyrinogen-iii c-methyltransferase | IZT61_20345 | Q58375 | + | 5003275 - 5004045 | 27267.9 |
| tsup family transporter | IZT61_20350 | O34430 | + | 5004029 - 5005543 | 55226.4 |
| phosphoadenylyl-sulfate reductase | IZT61_20355 | Q9RFS6 | + | 5005546 - 5006268 | 27951.9 |
| sulfate adenylyltransferase subunit cysd | IZT61_20360 | P65671 | + | 5007067 - 5007972 | 34569.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.