Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent alcohol dehydrogenase | IZT61_20265 | O82515 | + | 4985840 - 4986883 | 37818.4 |
| duf1543 domain-containing protein | IZT61_20270 | Not Available | - | 4987044 - 4987583 | 20344.2 |
| duf1810 domain-containing protein | IZT61_20275 | Not Available | - | 4987609 - 4988037 | 16174.3 |
| outer membrane beta-barrel protein | IZT61_20280 | Not Available | - | 4988177 - 4988878 | 25747.6 |
| outer membrane beta-barrel protein | IZT61_20285 | Not Available | - | 4988956 - 4989591 | 23589.8 |
| hypothetical protein | IZT61_20290 | Not Available | - | 4989736 - 4990422 | 27478.7 |
| formylglycine-generating enzyme family protein | IZT61_20295 | Q8R0F3 | - | 4990664 - 4991710 | 39034.0 |
| haloacid dehalogenase-like hydrolase | IZT61_20300 | Not Available | - | 4992072 - 4993082 | 37690.8 |
| hypothetical protein | IZT61_20305 | Not Available | - | 4993180 - 4993656 | 18162.1 |
| arylsulfatase | IZT61_20310 | P25549 | - | 4993723 - 4995306 | 59665.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.