Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | IZT61_20065 | Not Available | - | 4919745 - 4920746 | 37900.1 |
| sigma-70 family rna polymerase sigma factor | IZT61_20070 | P23484 | - | 4920806 - 4921354 | 21182.9 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | IZT61_20075 | Q05865 | - | 4921608 - 4922897 | 47458.7 |
| duf1016 family protein | IZT61_20080 | P45423 | - | 4923350 - 4924360 | 39595.7 |
| energy transducer tonb | IZT61_20085 | Not Available | - | 4924791 - 4925624 | 29335.2 |
| biopolymer transporter exbd | IZT61_20090 | Not Available | - | 4925624 - 4926025 | 14871.3 |
| mota/tolq/exbb proton channel family protein | IZT61_20095 | O27101 | - | 4926025 - 4926729 | 25407.9 |
| spor domain-containing protein | IZT61_20100 | Not Available | - | 4926731 - 4928392 | 62172.1 |
| hypothetical protein | IZT61_20105 | Not Available | + | 4929267 - 4929596 | 12079.3 |
| hypothetical protein | IZT61_20110 | Not Available | + | 4929600 - 4929878 | 10344.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.