Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4835 family protein | IZT61_19965 | Not Available | - | 4877525 - 4878415 | 33221.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | IZT61_19970 | A0A2I9 | - | 4878412 - 4879608 | 43025.3 |
| dna-directed rna polymerase subunit omega | IZT61_19975 | Not Available | - | 4879687 - 4880013 | 12549.8 |
| outer membrane protein assembly factor bamd | IZT61_19980 | Not Available | - | 4880021 - 4880965 | 36294.0 |
| 16s ribosomal rna | Not Available | Not Available | + | 4882687 - 4884208 | Not Available |
| Trna-ile | Not Available | Not Available | + | 4884442 - 4884516 | Not Available |
| Trna-ala | Not Available | Not Available | + | 4884605 - 4884681 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 4885097 - 4887973 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 4888113 - 4888224 | Not Available |
| type ix secretion system membrane protein porp/sprf | IZT61_20010 | Not Available | - | 4888547 - 4889509 | 36090.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.