Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | IZT61_19915 | P37571 | + | 4862279 - 4864831 | 95138.9 |
| cap domain-containing protein | IZT61_19920 | O31398 | + | 4865015 - 4865542 | 19013.9 |
| hypothetical protein | IZT61_19925 | D2Z030 | - | 4865564 - 4866436 | 33571.0 |
| pa0069 family radical sam protein | IZT61_19930 | P9WL78 | - | 4866777 - 4867844 | 40507.7 |
| carboxypeptidase-like regulatory domain-containing protein | IZT61_19935 | Q8A1G1 | - | 4868173 - 4869405 | 47126.7 |
| carboxypeptidase-like regulatory domain-containing protein | IZT61_19940 | Q8R4V4 | - | 4869473 - 4870708 | 46412.0 |
| dna repair protein recn | IZT61_19945 | A5F379 | - | 4870915 - 4872567 | 61155.1 |
| m48 family metalloprotease | IZT61_19950 | P12287 | - | 4872670 - 4874559 | 72679.3 |
| blai/meci/copy family transcriptional regulator | IZT61_19955 | P68261 | - | 4874813 - 4875184 | 13993.8 |
| ahpc/tsa family protein | IZT61_19960 | Q73B22 | - | 4875742 - 4876857 | 41797.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.