Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2200 domain-containing protein | IZT61_19865 | Not Available | - | 4849426 - 4849791 | 14103.1 |
| duf1801 domain-containing protein | IZT61_19870 | Not Available | - | 4849788 - 4850180 | 15340.2 |
| nuclear transport factor 2 family protein | IZT61_19875 | Not Available | - | 4850217 - 4850597 | 14065.1 |
| hypothetical protein | IZT61_19880 | Not Available | - | 4851129 - 4851833 | 27535.6 |
| energy-dependent translational throttle protein etta | IZT61_19885 | P45127 | - | 4852111 - 4853790 | 62697.5 |
| tonb-dependent receptor | IZT61_19890 | Not Available | - | 4854887 - 4857280 | 89786.1 |
| httm domain-containing protein | IZT61_19895 | O88496 | - | 4857277 - 4858659 | 53711.9 |
| imelysin family protein | IZT61_19900 | P12608 | - | 4858649 - 4859743 | 39751.2 |
| duf4856 domain-containing protein | IZT61_19905 | Not Available | - | 4859853 - 4860956 | 39942.6 |
| response regulator transcription factor | IZT61_19910 | P0A4H7 | + | 4861089 - 4861763 | 25267.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.