Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_19765 | Not Available | - | 4824786 - 4824941 | 6022.25 |
| pin domain-containing protein | IZT61_19770 | Not Available | - | 4824925 - 4825395 | 18474.2 |
| sodium-translocating pyrophosphatase | IZT61_19775 | Q2RIS7 | - | 4825446 - 4827692 | 78695.9 |
| amino acid permease | IZT61_19780 | Q9QXW9 | + | 4828329 - 4829747 | 51377.3 |
| tigr01212 family radical sam protein | IZT61_19785 | O35008 | + | 4830335 - 4831282 | 36007.2 |
| ammonium transporter | IZT61_19790 | O26759 | + | 4831628 - 4833028 | 49391.9 |
| porin | IZT61_19795 | Not Available | + | 4833069 - 4834085 | 36278.5 |
| duf4468 domain-containing protein | IZT61_19800 | Not Available | + | 4834174 - 4834755 | 22049.6 |
| srpbcc family protein | IZT61_19805 | Not Available | - | 4835102 - 4835569 | 18096.1 |
| spondin domain-containing protein | IZT61_19810 | Not Available | + | 4835765 - 4837072 | 45977.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.