Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | IZT61_19665 | Q9AQM4 | + | 4800997 - 4801761 | 28956.2 |
| cbs domain-containing protein | IZT61_19670 | P39066 | + | 4801761 - 4802423 | 24537.1 |
| nad kinase | IZT61_19675 | Q11PL9 | + | 4802432 - 4803313 | 32744.2 |
| outer membrane beta-barrel protein | IZT61_19680 | Not Available | + | 4803316 - 4804113 | 29618.1 |
| isoprenyl transferase | IZT61_19685 | Q8A1E0 | + | 4804133 - 4804873 | 28313.8 |
| outer membrane protein assembly factor bama | IZT61_19690 | Q9K1H0 | + | 4805023 - 4807563 | 95257.4 |
| omph family outer membrane protein | IZT61_19695 | Not Available | + | 4807740 - 4808270 | 20423.5 |
| omph family outer membrane protein | IZT61_19700 | P31519 | + | 4808339 - 4808914 | 20332.3 |
| glutamate racemase | IZT61_19705 | B2V9I5 | + | 4809725 - 4810543 | 30738.0 |
| class ii glutamine amidotransferase | IZT61_19710 | Q9L6B8 | + | 4810768 - 4812669 | 72570.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.