Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | IZT61_19515 | C0H3S6 | + | 4767721 - 4768059 | 12745.5 |
| hypothetical protein | IZT61_19520 | Not Available | + | 4768061 - 4768744 | 26426.0 |
| hypothetical protein | IZT61_19525 | Not Available | + | 4768833 - 4769444 | 23000.4 |
| hypothetical protein | IZT61_19530 | Q8YSU5 | - | 4769534 - 4770460 | 35599.7 |
| hypothetical protein | IZT61_19535 | Not Available | - | 4770487 - 4770978 | 18995.7 |
| response regulator transcription factor | IZT61_19540 | Q82Z76 | - | 4771190 - 4771900 | 27013.0 |
| hypothetical protein | IZT61_19545 | Not Available | + | 4772192 - 4772425 | 8961.77 |
| hypothetical protein | IZT61_19550 | Not Available | + | 4772730 - 4773770 | 40364.3 |
| vitamin k epoxide reductase family protein | IZT61_19555 | Not Available | + | 4773950 - 4775350 | 54835.7 |
| peptidase domain-containing abc transporter | IZT61_19560 | P59852 | + | 4775545 - 4777722 | 82443.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.