Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar mfs transporter | IZT61_01910 | Q2YIJ8 | - | 444515 - 445801 | 46446.8 |
| formylglycine-generating enzyme family protein | IZT61_01915 | Q0P5L5 | - | 445885 - 447003 | 41671.8 |
| Trna-lys | Not Available | Not Available | + | 447185 - 447257 | Not Available |
| site-specific integrase | IZT61_01925 | Q9KCP0 | + | 447505 - 448713 | 46208.3 |
| hypothetical protein | IZT61_01930 | Not Available | + | 448788 - 449288 | 20220.3 |
| nucleotidyl transferase abieii/abigii toxin family protein | IZT61_01935 | O66416 | + | 449246 - 449950 | 26759.9 |
| hypothetical protein | IZT61_01940 | Not Available | - | 450092 - 450406 | 12185.8 |
| hypothetical protein | IZT61_01945 | Not Available | - | 450423 - 450737 | 11569.8 |
| hypothetical protein | IZT61_01950 | Not Available | - | 450748 - 451155 | 15444.5 |
| hypothetical protein | IZT61_01955 | Q79G84 | - | 451278 - 451949 | 25867.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.