Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | IZT61_19415 | Q8A468 | + | 4740675 - 4741052 | 12820.5 |
| dna-directed rna polymerase subunit beta | IZT61_19420 | A5FIJ3 | + | 4741210 - 4745013 | 142317.0 |
| dna-directed rna polymerase subunit beta' | IZT61_19425 | Q11QA6 | + | 4745104 - 4749390 | 159621.0 |
| hypothetical protein | IZT61_19430 | Not Available | + | 4749730 - 4749996 | 9902.2 |
| duf4091 domain-containing protein | IZT61_19435 | Not Available | + | 4750389 - 4752122 | 65823.6 |
| duf3467 domain-containing protein | IZT61_19440 | Not Available | + | 4752281 - 4752592 | 11486.8 |
| outer membrane protein transport protein | IZT61_19445 | P80603 | + | 4752670 - 4753893 | 44007.1 |
| g-d-s-l family lipolytic protein | IZT61_19450 | Not Available | + | 4753905 - 4755203 | 45155.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | IZT61_19455 | A0LZ43 | - | 4755620 - 4756525 | 34477.4 |
| hypothetical protein | IZT61_19460 | Not Available | - | 4756598 - 4757242 | 24845.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.