Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_19265 | Not Available | - | 4714313 - 4715464 | 45348.8 |
| hypothetical protein | IZT61_19270 | Not Available | + | 4715672 - 4715887 | 8431.05 |
| lysophospholipid acyltransferase family protein | IZT61_19275 | Not Available | - | 4716035 - 4717786 | 66527.4 |
| helix-hairpin-helix domain-containing protein | IZT61_19280 | Q6IND4 | + | 4717877 - 4718773 | 34032.4 |
| acyl-coa dehydrogenase family protein | IZT61_19285 | P45867 | + | 4719308 - 4720459 | 41649.0 |
| hypothetical protein | IZT61_19290 | Not Available | + | 4720780 - 4720953 | 6176.65 |
| hypothetical protein | IZT61_19295 | Not Available | - | 4721147 - 4721533 | 14693.0 |
| 30s ribosomal protein s21 | IZT61_19300 | A6LE91 | + | 4721695 - 4721889 | 7555.24 |
| tyrosine-type recombinase/integrase | IZT61_19305 | B3QM22 | + | 4722042 - 4722926 | 33653.5 |
| ribosome-associated translation inhibitor raia | IZT61_19310 | P17161 | + | 4722941 - 4723288 | 13045.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.