Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | IZT61_19215 | Q64T65 | + | 4702573 - 4704972 | 88012.2 |
| hypothetical protein | IZT61_19220 | Not Available | + | 4705003 - 4705293 | 10843.2 |
| cell division protein zapa | IZT61_19225 | Q0I2U9 | + | 4705329 - 4705619 | 11133.3 |
| ribonuclease y | IZT61_19230 | Q5L9Y0 | + | 4705938 - 4707509 | 58769.1 |
| duf962 domain-containing protein | IZT61_19235 | O13737 | + | 4707804 - 4708319 | 19696.5 |
| tonb-dependent receptor | IZT61_19240 | Not Available | + | 4708676 - 4711432 | 102259.0 |
| hypothetical protein | IZT61_19245 | Not Available | + | 4711620 - 4713071 | 49968.3 |
| hypothetical protein | IZT61_19250 | Not Available | - | 4713304 - 4713612 | 11292.8 |
| feob-associated cys-rich membrane protein | IZT61_19255 | Not Available | + | 4713764 - 4713913 | 5810.27 |
| hypothetical protein | IZT61_19260 | Not Available | - | 4713910 - 4714185 | 10087.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.