Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | IZT61_19165 | P52422 | - | 4696078 - 4696656 | 22122.7 |
| 30s ribosomal protein s20 | IZT61_19170 | Q11TZ6 | + | 4696901 - 4697155 | 9602.93 |
| dna repair protein radc | IZT61_19175 | A5FMW5 | + | 4697225 - 4697923 | 26113.3 |
| endonuclease/exonuclease/phosphatase family protein | IZT61_19180 | Q5UQW5 | + | 4698054 - 4698893 | 31691.0 |
| prolipoprotein diacylglyceryl transferase | IZT61_19185 | B9KF57 | + | 4698908 - 4699654 | 28559.9 |
| dmt family transporter | IZT61_19190 | Q58036 | + | 4699663 - 4701057 | 53083.9 |
| hypothetical protein | IZT61_19195 | Not Available | + | 4701059 - 4701247 | 6270.29 |
| hypothetical protein | IZT61_19200 | Not Available | + | 4701251 - 4701445 | 6795.93 |
| duf86 domain-containing protein | IZT61_19205 | Q8RBR1 | - | 4701718 - 4702011 | 11443.0 |
| nucleotidyltransferase domain-containing protein | IZT61_19210 | I3ZRF1 | - | 4702042 - 4702353 | 11580.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.