Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | IZT61_19065 | Q08021 | + | 4670007 - 4670489 | 17623.2 |
| glycoside hydrolase family protein | IZT61_19070 | Not Available | + | 4670559 - 4671677 | 42013.1 |
| nucleoside triphosphate pyrophosphohydrolase family protein | IZT61_19075 | Q5UQE7 | + | 4671851 - 4672318 | 17557.8 |
| l-rhamnose/proton symporter rhat | IZT61_19080 | A7FN78 | + | 4672614 - 4673708 | 39755.3 |
| bifunctional aldolase/short-chain dehydrogenase | IZT61_19085 | P40747 | + | 4673736 - 4675856 | 76850.8 |
| sugar isomerase | IZT61_19090 | Q92S14 | + | 4676081 - 4677364 | 47203.1 |
| carbohydrate kinase | IZT61_19095 | Q9KCM0 | + | 4677382 - 4678761 | 51865.9 |
| hypothetical protein | IZT61_19100 | Not Available | + | 4679032 - 4679265 | 8846.04 |
| txe/yoeb family addiction module toxin | IZT61_19105 | P69348 | + | 4679256 - 4679513 | 9920.03 |
| gntr family transcriptional regulator | IZT61_19110 | O34712 | + | 4679711 - 4680742 | 39053.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.