Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | IZT61_19015 | Not Available | - | 4659818 - 4662298 | 91659.0 |
| abc transporter atpase | IZT61_19020 | Not Available | - | 4662646 - 4663125 | 18493.9 |
| hypothetical protein | IZT61_19025 | Not Available | + | 4663178 - 4663648 | 17677.2 |
| (fe-s)-binding protein | IZT61_19030 | P45866 | - | 4663748 - 4664536 | 28971.1 |
| 4fe-4s dicluster domain-containing protein | IZT61_19035 | P45866 | - | 4664714 - 4666009 | 48655.6 |
| Trna-phe | Not Available | Not Available | + | 4666228 - 4666300 | Not Available |
| Trna-phe | Not Available | Not Available | + | 4666599 - 4666671 | Not Available |
| srpbcc domain-containing protein | IZT61_19050 | Not Available | - | 4666772 - 4667221 | 16669.5 |
| hypothetical protein | IZT61_19055 | O04073 | + | 4667592 - 4669196 | 57867.2 |
| hypothetical protein | IZT61_19060 | Not Available | - | 4669231 - 4669830 | 21576.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.