Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | IZT61_18865 | T2KN63 | - | 4626717 - 4628270 | 57515.6 |
| tonb-dependent receptor | IZT61_18870 | T2KPJ3 | - | 4628288 - 4631308 | 109695.0 |
| transcriptional regulator | IZT61_18875 | Not Available | - | 4631664 - 4634543 | 110323.0 |
| ykgb family protein | IZT61_18880 | P46928 | - | 4634788 - 4635381 | 21907.2 |
| fad-dependent monooxygenase | IZT61_18885 | Q01911 | - | 4635492 - 4636652 | 42386.6 |
| arac family transcriptional regulator | IZT61_18890 | Not Available | - | 4636682 - 4637437 | 28574.3 |
| hypothetical protein | IZT61_18895 | Not Available | - | 4637498 - 4637851 | 13956.8 |
| single-stranded dna-binding protein | IZT61_18900 | Q89A53 | + | 4638296 - 4638640 | 12708.3 |
| tonb-dependent receptor | IZT61_18905 | P76115 | - | 4639332 - 4641386 | 76686.3 |
| sorbosone dehydrogenase family protein | IZT61_18910 | Q44091 | - | 4641461 - 4642780 | 47426.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.