Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | IZT61_18765 | Q0TUZ0 | - | 4598096 - 4598965 | 32197.4 |
| tim barrel protein | IZT61_18770 | B2V4K2 | - | 4598977 - 4599849 | 32459.8 |
| nucleoside permease | IZT61_18775 | P76417 | - | 4599905 - 4601134 | 45111.3 |
| duf1080 domain-containing protein | IZT61_18780 | Not Available | - | 4601318 - 4601998 | 25184.9 |
| gfo/idh/moca family oxidoreductase | IZT61_18785 | A8H2K3 | - | 4602081 - 4603538 | 54304.6 |
| c-type cytochrome | IZT61_18790 | P15452 | - | 4603601 - 4603861 | 9485.87 |
| sugar phosphate isomerase/epimerase | IZT61_18795 | Q65D04 | - | 4604231 - 4605283 | 39545.6 |
| gfo/idh/moca family oxidoreductase | IZT61_18800 | P55480 | - | 4605293 - 4606450 | 42283.7 |
| gmc family oxidoreductase | IZT61_18805 | Q3YAT3 | - | 4606660 - 4608360 | 64227.2 |
| gluconate 2-dehydrogenase subunit 3 family protein | IZT61_18810 | Not Available | - | 4608387 - 4608971 | 21696.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.