Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_18715 | Not Available | + | 4582202 - 4584286 | 77349.9 |
| trimeric intracellular cation channel family protein | IZT61_18720 | Q9R9S0 | + | 4584599 - 4585210 | 22091.4 |
| septum formation initiator family protein | IZT61_18725 | Not Available | - | 4585320 - 4585616 | 11901.3 |
| phosphopyruvate hydratase | IZT61_18730 | A5FN12 | - | 4585792 - 4587087 | 46268.6 |
| alpha/beta hydrolase | IZT61_18735 | P55192 | - | 4587689 - 4588510 | 31396.9 |
| mechanosensitive ion channel | IZT61_18740 | P77338 | + | 4588765 - 4591125 | 87932.8 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | IZT61_18745 | P39844 | - | 4591411 - 4592817 | 50926.0 |
| atp-binding protein | IZT61_18750 | P9WLM8 | - | 4592888 - 4594012 | 42893.9 |
| aspartate-semialdehyde dehydrogenase | IZT61_18755 | O67716 | - | 4594246 - 4595235 | 36317.1 |
| lamin tail domain-containing protein | IZT61_18760 | Not Available | + | 4595285 - 4597822 | 92091.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.