Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | IZT61_18415 | O96876 | + | 4515324 - 4515794 | 16997.7 |
| d-ta family plp-dependent enzyme | IZT61_18420 | A1B8Z1 | + | 4515803 - 4516915 | 41804.6 |
| membrane dipeptidase | IZT61_18425 | P27509 | + | 4516925 - 4517995 | 39813.9 |
| dmt family transporter | IZT61_18430 | T2KMH9 | + | 4518541 - 4520015 | 52413.2 |
| hypothetical protein | IZT61_18435 | Not Available | + | 4520215 - 4520655 | 15364.9 |
| hypothetical protein | IZT61_18440 | Not Available | + | 4520786 - 4520998 | 7748.05 |
| hypothetical protein | IZT61_18445 | Not Available | + | 4521026 - 4521319 | 11087.6 |
| fad-dependent oxidoreductase | IZT61_18450 | O07622 | - | 4521744 - 4523291 | 56804.6 |
| ankyrin repeat domain-containing protein | IZT61_18455 | Q6P6B7 | - | 4523352 - 4523861 | 17683.8 |
| ferritin-like domain-containing protein | IZT61_18460 | P21362 | - | 4524315 - 4524872 | 20308.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.