Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
excinuclease abc subunit uvraIZT61_18215Q5HQW9+4458559 - 4461363103950.0
lyse family transporterIZT61_18220Not Available+4461380 - 446203324628.9
peptidoglycan dd-metalloendopeptidase family proteinIZT61_18225P44693-4462279 - 446359847929.2
abc transporter atp-binding proteinIZT61_18230P33116-4463962 - 446579768816.5
response regulatorIZT61_18235T2KMF4-4466073 - 446712539648.4
hybrid sensor histidine kinase/response regulatorIZT61_18240T2KMF4-4467228 - 4470113109635.0
tonb-dependent receptorIZT61_18245T2KPJ3+4470760 - 4473921115537.0
ragb/susd family nutrient uptake outer membrane proteinIZT61_18250T2KN63+4473941 - 447584569407.1
duf5017 domain-containing proteinIZT61_18255Not Available+4475868 - 447679133534.6
alpha-l-fucosidaseIZT61_18260Q8GW72+4477405 - 447891656659.1

Displaying genes 3641 – 3650 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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