Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | IZT61_18015 | T2KMI3 | - | 4411553 - 4412722 | 44852.1 |
| hypothetical protein | IZT61_18020 | Not Available | - | 4413243 - 4413404 | 5988.34 |
| duf3891 family protein | IZT61_18025 | Not Available | - | 4413556 - 4414269 | 27347.8 |
| hypothetical protein | IZT61_18030 | Not Available | - | 4416170 - 4416814 | 24676.8 |
| hypothetical protein | IZT61_18035 | Not Available | - | 4417141 - 4417329 | 7460.24 |
| hypothetical protein | IZT61_18040 | Not Available | + | 4418262 - 4418768 | 19391.7 |
| hypothetical protein | IZT61_18045 | Not Available | + | 4420117 - 4420320 | 7753.32 |
| hypothetical protein | IZT61_18050 | Not Available | + | 4420367 - 4420630 | 8998.95 |
| hypothetical protein | IZT61_18055 | Not Available | - | 4420805 - 4421752 | 36092.6 |
| hypothetical protein | IZT61_18060 | Not Available | - | 4421786 - 4423489 | 66268.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.