Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | IZT61_01760 | P44099 | + | 408229 - 409674 | 55963.4 |
| yceh family protein | IZT61_01765 | B1ZXJ5 | + | 409891 - 410541 | 24058.8 |
| beta-ketoacyl-acp synthase ii | IZT61_01770 | O34340 | - | 410543 - 411793 | 43901.2 |
| sdr family nad(p)-dependent oxidoreductase | IZT61_01775 | P39577 | - | 411931 - 412683 | 27133.8 |
| tetr/acrr family transcriptional regulator | IZT61_01780 | Q9RMY4 | - | 412730 - 413314 | 21062.4 |
| helix-turn-helix transcriptional regulator | IZT61_01785 | B5F0M9 | + | 413511 - 414422 | 35375.9 |
| sdr family nad(p)-dependent oxidoreductase | IZT61_01790 | A6SSW9 | + | 414505 - 415338 | 29274.2 |
| sdr family nad(p)-dependent oxidoreductase | IZT61_01795 | A6SSW9 | + | 415426 - 416277 | 30258.8 |
| thioredoxin family protein | IZT61_01800 | P9WIE0 | - | 416408 - 417013 | 21559.7 |
| tlpa family protein disulfide reductase | IZT61_01805 | Q8CXF3 | - | 417021 - 417488 | 18083.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.