Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_17265 | Not Available | + | 4215146 - 4215388 | 9031.83 |
| txe/yoeb family addiction module toxin | IZT61_17270 | P0CJ64 | + | 4215388 - 4215651 | 10246.3 |
| tigr00159 family protein | IZT61_17275 | A0A0H3GM48 | - | 4215711 - 4216502 | 29886.1 |
| dihydropteroate synthase | IZT61_17280 | P0AC14 | - | 4217224 - 4218081 | 31569.4 |
| duf1599 domain-containing protein | IZT61_17285 | Not Available | + | 4218179 - 4218724 | 20715.2 |
| doxx family protein | IZT61_17290 | Q45FN5 | + | 4218730 - 4219881 | 43294.3 |
| abc transporter permease | IZT61_17295 | P94311 | + | 4219881 - 4220936 | 39042.5 |
| damage-inducible protein dinb | IZT61_17300 | Q02886 | + | 4220938 - 4221384 | 17426.8 |
| aaa family atpase | IZT61_17305 | Q8A2B2 | + | 4221404 - 4221907 | 18925.8 |
| phytoene desaturase | IZT61_17310 | Q7WT72 | - | 4222062 - 4223540 | 55430.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.