Pedobacter endophyticus JBR3-12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter endophyticus
StrainJBR3-12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter endophyticus JBR3-12

Accession NumberCP064939.1

Gene Summary

Adenine Count

1588031 bp

Thymine Count

1595629 bp

Guanine Count

1118331 bp

Cytosine Count

1124079 bp

Genome Length

5426070 bp

Protein-coding Genes

4366 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
aldehyde dehydrogenase family proteinIZT61_17165H2IFE7-4193198 - 419456249996.9
gamma-glutamyl-gamma-aminobutyrate hydrolase family proteinIZT61_17170Q9ZDC7-4194707 - 419542027209.2
iron-containing alcohol dehydrogenaseIZT61_17175Q59104-4195880 - 419702841917.3
glutamine synthetaseIZT61_17180P0C7B6-4197328 - 419868950869.8
ethanolamine permeaseIZT61_17185O87394-4198689 - 420000246907.8
yiaa/yiab family proteinIZT61_17190P0ADJ8-4200558 - 420096515160.7
nad(p)h-hydrate dehydrataseIZT61_17195B5YIM0+4201128 - 420259153116.8
aim24 family proteinIZT61_17200Not Available+4202791 - 420349525710.0
anti-sigma factorIZT61_17205Not Available-4203619 - 420447331236.4
sigma-70 family rna polymerase sigma factorIZT61_17210Q7U1Z6-4204476 - 420502720893.3

Displaying genes 3431 – 3440 of 4428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites