Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4133 domain-containing protein | IZT61_16915 | Not Available | + | 4138750 - 4139046 | 10700.4 |
| dmt family transporter | IZT61_16920 | P18004 | + | 4139027 - 4140946 | 72898.8 |
| group ii intron reverse transcriptase/maturase | IZT61_16925 | P19593 | + | 4141548 - 4143212 | 64106.7 |
| hypothetical protein | IZT61_16930 | Not Available | + | 4143209 - 4143835 | 23266.1 |
| hypothetical protein | IZT61_16935 | Not Available | + | 4143856 - 4144518 | 24006.2 |
| hypothetical protein | IZT61_16940 | Not Available | + | 4144515 - 4145168 | 24452.5 |
| hypothetical protein | IZT61_16945 | Not Available | + | 4145173 - 4145826 | 24453.9 |
| dmt family transporter | IZT61_16950 | P27190 | + | 4146123 - 4147034 | 34067.1 |
| duf4099 domain-containing protein | IZT61_16955 | Not Available | + | 4147043 - 4147843 | 29701.6 |
| hypothetical protein | IZT61_16960 | Not Available | + | 4148306 - 4148623 | 12213.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.