Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_16865 | Not Available | + | 4131466 - 4131945 | 18254.5 |
| toprim domain-containing protein | IZT61_16870 | Not Available | + | 4133292 - 4134263 | 36398.1 |
| hypothetical protein | IZT61_16875 | Not Available | - | 4134359 - 4134937 | 22222.6 |
| plasmid mobilization relaxosome protein mobc | IZT61_16880 | Not Available | + | 4135141 - 4135551 | 15821.5 |
| relaxase/mobilization nuclease domain-containing protein | IZT61_16885 | Not Available | + | 4135554 - 4136744 | 44773.6 |
| para family protein | IZT61_16890 | Not Available | + | 4136756 - 4137391 | 23588.0 |
| hypothetical protein | IZT61_16895 | Not Available | + | 4137388 - 4137768 | 14468.5 |
| hypothetical protein | IZT61_16900 | Not Available | + | 4137755 - 4138081 | 12423.0 |
| duf4134 family protein | IZT61_16905 | Not Available | + | 4138089 - 4138400 | 11455.2 |
| duf4134 domain-containing protein | IZT61_16910 | Not Available | + | 4138432 - 4138743 | 10639.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.