Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_16815 | Not Available | + | 4116394 - 4117761 | 50742.3 |
| hypothetical protein | IZT61_16820 | Not Available | + | 4117888 - 4118379 | 19094.9 |
| carboxypeptidase-like regulatory domain-containing protein | IZT61_16825 | Not Available | + | 4119865 - 4120446 | 21487.1 |
| gtra family protein | IZT61_16830 | Not Available | - | 4120546 - 4120974 | 16461.6 |
| hypothetical protein | IZT61_16835 | Q20144 | - | 4121280 - 4122524 | 48297.4 |
| hypothetical protein | IZT61_16840 | Not Available | + | 4122705 - 4124714 | 77170.6 |
| hypothetical protein | IZT61_16845 | Q1LZA0 | + | 4124760 - 4126292 | 58340.5 |
| hypothetical protein | IZT61_16850 | Not Available | - | 4126289 - 4127827 | 59027.8 |
| nad(p)/fad-dependent oxidoreductase | IZT61_16855 | P48537 | + | 4128187 - 4129770 | 59864.0 |
| hypothetical protein | IZT61_16860 | Not Available | + | 4130000 - 4131463 | 52799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.