Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
1588031 bp
Thymine Count
1595629 bp
Guanine Count
1118331 bp
Cytosine Count
1124079 bp
Genome Length
5426070 bp
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IZT61_16515 | Not Available | + | 4059234 - 4059860 | 23338.1 |
| hypothetical protein | IZT61_16520 | Not Available | + | 4059883 - 4060545 | 23991.3 |
| hypothetical protein | IZT61_16525 | Not Available | + | 4060542 - 4061195 | 24529.8 |
| hypothetical protein | IZT61_16530 | Not Available | + | 4061200 - 4061862 | 24660.2 |
| hypothetical protein | IZT61_16535 | Not Available | + | 4061944 - 4062714 | 29582.7 |
| plasmid transfer protein | IZT61_16540 | Not Available | + | 4062718 - 4063848 | 41896.2 |
| conjugative transposon protein trak | IZT61_16545 | Not Available | + | 4063850 - 4064473 | 23886.8 |
| hypothetical protein | IZT61_16550 | Not Available | + | 4064470 - 4064856 | 14430.3 |
| conjugative transposon protein tram | IZT61_16555 | Not Available | + | 4064863 - 4066086 | 45381.3 |
| duf4138 domain-containing protein | IZT61_16560 | Not Available | + | 4066093 - 4066932 | 31179.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.