Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter endophyticus |
| Strain | JBR3-12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter endophyticus JBR3-12
Accession NumberCP064939.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4366 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stas/sec14 domain-containing protein | IZT61_01610 | Not Available | + | 372841 - 373209 | 13657.2 |
| hypothetical protein | IZT61_01615 | Not Available | + | 373224 - 373376 | 5380.31 |
| mechanosensitive ion channel family protein | IZT61_01620 | Q89AB5 | + | 373395 - 374198 | 29832.1 |
| response regulator transcription factor | IZT61_01625 | Q2FWH6 | - | 374195 - 374569 | 13781.8 |
| gaf domain-containing protein | IZT61_01630 | Q9R6X3 | + | 374714 - 376927 | 82764.0 |
| response regulator | IZT61_01635 | Q55169 | + | 376930 - 377349 | 15864.1 |
| biliverdin-producing heme oxygenase | IZT61_01640 | Not Available | + | 377426 - 378019 | 22094.5 |
| histone h1 | IZT61_01645 | Not Available | + | 378194 - 378373 | 6397.71 |
| rna polymerase sigma factor | IZT61_01650 | Q7AKG9 | - | 378489 - 379004 | 19744.9 |
| hypothetical protein | IZT61_01655 | Not Available | + | 379736 - 379969 | 8673.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.